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BaseInfo

ncRNA ID novel_zma_miR11687
Species Zea mays
Class miRNA
Genome position Chr10:57714669-57714719 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 28 - CAUUACCGAGAGUAGGACUUUGUC - 51
Stem-loop(if miRNA) --A                   ACG
   AGAGUCCUACUCUCGGUAA   U
   |||||||||||||||||||   G
   UUUCAGGAUGAGAGCCAUU   G
CUG                   ACU
Stem-loop sequence AAGAGUCCUACUCUCGGUAAACGUGGUCAUUACCGAGAGUAGGACUUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170198.1
ncRNA:24   CUGUUUCAGGAUGAGAGCCAUUAC   1
  |=||*|||||||||||||||||*|
targets:5   GGCAUAGUCCUACUCUCGGUAACG   28

1.5 Sequence 7862 from Patent EP2559767 NA coding protein psRNATarget
LQ241867.1
ncRNA:24   CUGUUUCAGGAUGAGAGCCAUUAC   1
  |=||*|||||||||||||||||*|
targets:5   GGCAUAGUCCUACUCUCGGUAACG   28

1.5 Sequence 7862 from Patent EP2985353 NA coding protein psRNATarget
HI409737.1
ncRNA:24   CUGUUUCAGGAUGAGAGCCAUUAC   1
  |=||*|||||||||||||||||*|
targets:5   GGCAUAGUCCUACUCUCGGUAACG   28

1.5 Sequence 7862 from Patent EP2074227 NA coding protein psRNATarget