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BaseInfo

ncRNA ID novel_zma_miR11676
Species Zea mays
Class miRNA
Genome position Chr4:3598631-3598710 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 25
Mature sequence(if miRNA) 56 - AGACUAAAGAAAUCAAACAUGGCCU - 80
Stem-loop(if miRNA) --    UA           -   GG   AAC    --    AU
  AGAC  AAGAAAUCAAA CAU  CCU   CCGU  UCAU  C
  ||||  ||||||||||| |||  |||   ||||  ||||  C
  UUUG  UUCUUUGGUUU GUG  GGA   GGCG  AGUA  A
UU    UC           A   -A   ---    GU    AA
Stem-loop sequence AGACUAAAGAAAUCAAACAUGGCCUAACCCGUUCAUAUCCAAAAUGAUGGCGGAGGAGUGAUUUGGUUUCUUCUGUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY107803.1
ncRNA:25   UCCGGUACAAACUAAAGAAAUCAGA   1
  ||||-|||||||||||||||||||*
targets:749   AGGC-AUGUUUGAUUUCUUUAGUCA   772

1.0 Zea mays PCO089242 mRNA sequence NA coding protein psRNATarget