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BaseInfo

ncRNA ID	novel_zma_miR11652
Species	Zea mays
Class	miRNA
Genome position	Chr4:185897337-185897389 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - CCAGACUGUCCGGUGAAUUAUAGC - 24
Stem-loop(if miRNA)	--               U   CA      UAUAAUUCACCGGAC GUC  GUGU   ||||||||||||||| |||  |||C   AUAUUAAGUGGCCUG CAG  CACA CG               U   AC
Stem-loop sequence	UAUAAUUCACCGGACUGUCCAGUGUCACACCAGACUGUCCGGUGAAUUAUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008650945.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   |||||||||||||||||*|||||| targets:843   GCUAUAAUUCACCGGACUGUCUGG   866 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA	NA	coding protein	psRNATarget
EU952069.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   |||||||||||||||||*|||||| targets:851   GCUAUAAUUCACCGGACUGUCUGG   874 Target Full Sequence	1.5	Zea mays clone 1155789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU959991.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   |||*|||||||||||||*|||||| targets:410   GCUUUAAUUCACCGGACUGUCUGG   433 Target Full Sequence	1.5	Zea mays clone 221041 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008663618.2	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   |||*|||||||||||||*|||||| targets:496   GCUUUAAUUCACCGGACUGUCUGG   519 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103640564 (LOC103640564), mRNA	NA	coding protein	psRNATarget
BT086229.2	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   ***=|==|*||||||||||||||| targets:404   CGAGUGGUGCACCGGACAGUCUGG   427 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds	NA	coding protein	psRNATarget
LQ242132.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   *|**|==*|||||||||||||||| targets:64   CCGUUGGCUCACCGGACAGUCUGG   87 Target Full Sequence	3.0	Sequence 8127 from Patent EP2985353	NA	coding protein	psRNATarget
JB170463.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   *|**|==*|||||||||||||||| targets:64   CCGUUGGCUCACCGGACAGUCUGG   87 Target Full Sequence	3.0	Sequence 8127 from Patent EP2559767	NA	coding protein	psRNATarget
HI410002.1	ncRNA:24   CGAUAUUAAGUGGCCUGUCAGACC   1   *|**|==*|||||||||||||||| targets:64   CCGUUGGCUCACCGGACAGUCUGG   87 Target Full Sequence	3.0	Sequence 8127 from Patent EP2074227	NA	coding protein	psRNATarget