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BaseInfo

ncRNA ID	novel_zma_miR11645
Species	Zea mays
Class	miRNA
Genome position	Chr8:37500707-37500774 [+]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	1 - UGCUCUCUGCACAAGGGCGGACGG - 24
Stem-loop(if miRNA)	U  -    U    A   --      G     C  G  GC UCUC GCAC AGG  GCGGAC GUCCG GC C  || |||| |||| |||  |||||| ||||| || G  CG GGAG CGUG UCC  UGCCUG CAGGC CG G G  C    -    G   GG      G     -  G
Stem-loop sequence	UGCUCUCUGCACAAGGGCGGACGGUCCGCGCGCGGGGCCGGACGGUCCGUGGCCUGGUGCGAGGCGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ067064.1	ncRNA:24   GGCAGGCGGGAACACGUCUCUCGU   1   ||||||||||*|||||||||=||| targets:37   CCGUCCGCCCCUGUGCAGAGGGCA   60 Target Full Sequence	2.5	TSA: Zea mays contig02698, mRNA sequence	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   GGCAGGCGGGAACACGUCUCUCGU   1   ||||||||||*|||||||||=||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   GGCAGGCGGGAACACGUCUCUCGU   1   ||||||||||*|||||||||=||| targets:1349   CCGUCCGCCCCUGUGCAGAGGGCA   1372 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
EU948904.1	ncRNA:24   GGCAGGCGGGAACACGUCUCUCGU   1   ||||||||||*||||*|||||||| targets:529   CCGUCCGCCCCUGUGAAGAGAGCA   552 Target Full Sequence	2.5	Zea mays clone 389441 mRNA sequence	NA	coding protein	psRNATarget
EU949034.1	ncRNA:24   GGCAGGCGGGAACACGUCUCUCGU   1   ||||||||||*||||*|||||||| targets:530   CCGUCCGCCCCUGUGAAGAGAGCA   553 Target Full Sequence	2.5	Zea mays clone 394358 mRNA sequence	NA	coding protein	psRNATarget