Search result

BaseInfo

ncRNA ID novel_zma_miR11640
Species Zea mays
Class miRNA
Genome position Chr4:232901378-232901541 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AUAUCGGCACAGUAAAUAAUGAAU - 24
Stem-loop(if miRNA) --            C   UA     GC     -       A    C           CCA    --G          UUAUAU
  UCAUUAUUUACU UGC  AUAUA  AAAUU UAAGUUC AGUU AUCAUAUGUUA   GAUA   AAAAAGGAAA      C
  |||||||||||| |||  |||||  ||||| ||||||| |||| |||||||||||   ||||   ||||||||||      U
  AGUAAUAAAUGA ACG  UAUAU  UUUAA GUUCAAG UUAA UAGUAUACAGU   UUAU   UUUUUUCUUU      A
UA            C   GC     AA     A       G    A           UUC    AUA          UCAGAU
Stem-loop sequence UCAUUAUUUACUCUGCUAAUAUAGCAAAUUUAAGUUCAAGUUCAUCAUAUGUUACCAGAUAGAAAAAGGAAAUUAUAUCUAUAGACUUUUCUUUUUUAUAUAUUCUUUGACAUAUGAUAAAUUGGAACUUGAAAUUUAAUAUAUCGGCACAGUAAAUAAUGAAU