ncRNA ID | novel_zma_miR11637 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:239817025-239817250 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 203 - UUAGCUCUUGGACACUAGAAAUGG - 226 |
Stem-loop(if miRNA) |
--      C         A              U                    CA  AG          C       AA  A    A  -AA    U     A  A   U  U   UUAGCU UUGGACACU GAAAUGGUACUAUU AUCAGGAACACACUGAGAAA  UU  UUAUUAUCAG GGCACAC  CA CGGU AA   UUUC AUUUU GA AAA CU A   |||||| ||||||||| |||||||||||||| ||||||||||||||||||||  ||  |||||||||| |||||||  || |||| ||   |||| ||||| || ||| || C   AAUCGA AACCUGUGA CUUUACCAUGAUAA UAGUCCUUGUGUGACUCUUU  AA  AGUAAUAGUC CUGUGUG  GU GCUA UU   AAAG UAAAG CU UUU GA A GA      A         C              -                    AC  CA          C       GC  C    A  GAA    -     G  A   U  A |
Stem-loop sequence | UUAGCUCUUGGACACUAGAAAUGGUACUAUUUAUCAGGAACACACUGAGAAACAUUAGUUAUUAUCAGCGGCACACAACAACGGUAAAAAUUUCUAUUUUAGAAAAAUCUUACAAAGUUUUAUCGGAAAUGAAAAAGUUAAUCGCUGCGGUGUGUCCCUGAUAAUGAACAACAUUUCUCAGUGUGUUCCUGAUAAUAGUACCAUUUCCAGUGUCCAAAAGCUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT066707.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0055L07 mRNA, complete cds | NA | coding protein | psRNATarget |