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BaseInfo

ncRNA ID novel_zma_miR11611
Species Zea mays
Class miRNA
Genome position Chr4:167164346-167164487 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 119 - AUUUCCACUGGCGGUUUUUAAAGC - 142
Stem-loop(if miRNA) --                                           AA    AGAU               U
  UUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GUUA    AACCGCCAGUGGAAA C
  |||||||||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||||
  AAAUUUUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CAAU    UUGGCGGUCACUUUU A
CG                                           CA    GUGU               A
Stem-loop sequence UUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUUGUGUAACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUUUUAAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069194.2
ncRNA:24   CGAAAU-UUUUGGCGGUCACCUUUA   1
  ||||||-||||||||||||||||||
targets:845   GCUUUAUAAAACCGCCAGUGGAAAU   869

2.0 Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds NA coding protein psRNATarget
NM_001176701.1
ncRNA:24   CGAAAU-UUUUGGCGGUCACCUUUA   1
  ||||||-||||||||||||||||||
targets:845   GCUUUAUAAAACCGCCAGUGGAAAU   869

2.0 Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA NA coding protein psRNATarget