ncRNA ID | novel_zma_miR11611 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:167164346-167164487 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AUUUCCACUGGCGGUUUUUAAAGC - 142 |
Stem-loop(if miRNA) |
--                                           AA    AGAU               U   UUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUU  GUUA    AACCGCCAGUGGAAA C   |||||||||||||||||||||||||||||||||||||||||||  ||||    |||||||||||||||   AAAUUUUUGGCGGUCACCUUUAUCCUACAAAGGUGACCGCCAA  CAAU    UUGGCGGUCACUUUU A CG                                           CA    GUGU               A |
Stem-loop sequence | UUUAAAAACCGCCAGUGGAAAUAGGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUUGUGUAACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUUUUAAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069194.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001176701.1 |
|
2.0 | Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA | NA | coding protein | psRNATarget |