Search result

BaseInfo

ncRNA ID osa-miRf10758-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GGAUUUUCGCAUGCGGUUGCCC - NA
Stem-loop(if miRNA)        UC                   C  U    A      -C       GAUC
GUGAAAA  GGAUUUUCGCAUGCGGUUG CC GGCC CAUGCG  AGAUCGU    U
|||||||  ||||||||||||||||||| || |||| ||||||  |||||||    U
CGCUUUU  UCUAAAAGCGUACGCCAAC GG CUGG GUACGC  UUUAGCA    U
       --                   C  U    C      AC       GACA
Stem-loop sequence GUGAAAAUCGGAUUUUCGCAUGCGGUUGCCCUGGCCACAUGCGCAGAUCGUGAUCUUUACAGACGAUUUCACGCAUGCGGUCUGGCCAACCGCAUGCGAAAAUCUUUUUCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK243572.1
ncRNA:22   CCCGUUGGCGUACGCUUUUAGG   1
  **|||||||||||||||||||*
targets:809   AAGCAACCGCAUGCGAAAAUCG   830

1.0 Oryza sativa Japonica Group cDNA, clone: J100082B16, full insert sequence NA coding protein psRNATarget
AK109653.1
ncRNA:22   CCCGUUGGCGUACGCUUUUAGG   1
  **||=*|||||||||||||||*
targets:602   AAGCGUCCGCAUGCGAAAAUCA   623

3.0 Oryza sativa Japonica Group cDNA clone:002-140-D12, full insert sequence NA coding protein psRNATarget
AK106655.1
ncRNA:22   CCCGUUGGCGUACGCUUUUAGG   1
  **||||||||||||||||||**
targets:233   AAGCAACCGCAUGCGAAAAUAG   254

2.5 Oryza sativa Japonica Group cDNA clone:002-113-G04, full insert sequence NA coding protein psRNATarget
AK109584.1
ncRNA:22   CCCGUUGGCGUACGCUUUUAGG   1
  **||||||||||||||||||**
targets:199   AAGCAACCGCAUGCGAAAAUAG   220

2.5 Oryza sativa Japonica Group cDNA clone:002-137-A10, full insert sequence NA coding protein psRNATarget
AK288934.1
ncRNA:22   CCCGUUGGCGUACGCUUUUAGG   1
  *|*|||||||*||||||||||*
targets:3387   AGUCAACCGCCUGCGAAAAUCA   3408

2.5 Oryza sativa Japonica Group cDNA, clone: J090082I21, full insert sequence NA coding protein psRNATarget