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BaseInfo

ncRNA ID	novel_zma_miR11604
Species	Zea mays
Class	miRNA
Genome position	Chr4:134963168-134963223 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	22
Mature sequence(if miRNA)	1 - CUUUAAACUGGACCGCAUGUGA - 22
Stem-loop(if miRNA)	--C      CU       A      UUA    UUUAAA  GGACCGC UGUGAU   U    ||||||  ||||||| ||||||   A    AAGUUU  CUUGGUG ACACUA   G GUC      -C       G      UCU
Stem-loop sequence	CUUUAAACUGGACCGCAUGUGAUUUAUAGUCUAUCACAGGUGGUUCCUUUGAACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001346990.1	ncRNA:22   AGUGUACGCCAGGUCAAAUUUC   1   |||||*|||||||||||*|||| targets:1406   UCACAGGCGGUCCAGUUCAAAG   1427 Target Full Sequence	2.5	Zea mays WAT1-related protein (LOC100304260), transcript variant 2, mRNA	NA	coding protein	psRNATarget
XM_008683066.2	ncRNA:22   AGUGUACGCCAGGUCAAAUUUC   1   |||||*|||||||||||*|||| targets:1476   UCACAGGCGGUCCAGUUCAAAG   1497 Target Full Sequence	2.5	PREDICTED: Zea mays WAT1-related protein (LOC100304260), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT068055.1	ncRNA:22   AGUGUACGCCAGGUCAAAUUUC   1   |||||*|||||||||||*|||| targets:1541   UCACAGGCGGUCCAGUUCAAAG   1562 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0031N10 mRNA, complete cds	NA	coding protein	psRNATarget
BT086495.1	ncRNA:22   AGUGUACGCCAGGUCAAAUUUC   1   |||||*|||||||||||*|||| targets:1615   UCACAGGCGGUCCAGUUCAAAG   1636 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0172L11 mRNA, complete cds	NA	coding protein	psRNATarget