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BaseInfo

ncRNA ID novel_zma_miR11601
Species Zea mays
Class miRNA
Genome position Chr10:22954708-22954764 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - ACGUGAAUUUCUGAUCCUGGUACG - 24
Stem-loop(if miRNA) --     U   G  UC         AUC
  UGCUA GAU AG  AUUUAUGUA   G
  ||||| ||| ||  |||||||||   C
  AUGGU CUA UC  UAAGUGCAU   U
GC     C   G  UU         GUG
Stem-loop sequence UGCUAUGAUGAGUCAUUUAUGUAAUCGCUGUGUACGUGAAUUUCUGAUCCUGGUACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ050603.1
ncRNA:24   GCAUGGUCCUAGUCUUUAAGUGCA   1
  |||=||||||||||*|||||||||
targets:11   CGUGCCAGGAUCAGCAAUUCACGU   34

1.5 TSA: Zea mays contig51723, mRNA sequence NA coding protein psRNATarget