ncRNA ID | novel_zma_miR11590 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:89702575-89702761 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 22 |
Mature sequence(if miRNA) | 166 - GUCUAGUUGGUUGUUUGCCUGC - 187 |
Stem-loop(if miRNA) |
--      -    A    CCA   G   A   UCACAAC  A        G    AC   A   U    G AAA    CA  AGUG G  C       C C   AGGCGG CAGC CGAU   ACG CUC GGC       GU CUUGAGUG UAGC  GCU GUU GCCA C   GAUG  GC    C GC UGCACAU G C   |||||| |||| ||||   ||| ||| |||       || |||||||| ||||  ||| ||| |||| |   ||||  ||    | || ||||||| |   UCCGUU GUUG GUUG   UGC GAG CCG       CA GAGCUCGU AUCG  CGA CGA CGGU G   CUAC  CG    G CG ACGUGUA C C CG      U    -    AUC   G   -   -CUAUAC  C        -    --   -   -    - --C    AG  --GA G  -       C G |
Stem-loop sequence | AGGCGGCAGCACGAUCCAACGGCUCAGGCUCACAACGUACUUGAGUGGUAGCACGCUAGUUUGCCAGCAAAGAUGCAGCAGUGCGGCCUGCACAUCGCCCGCCAUGUGCAGCGGAGGCGACAUCCGUGGCAGCAGCGCUAUGCUCGAGCACCAUAUCGCCGAGGCGUCUAGUUGGUUGUUUGCCUGC |