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BaseInfo

ncRNA ID novel_zma_miR11589
Species Zea mays
Class miRNA
Genome position Chr3:84147234-84147303 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 47 - AAAAUAGACUUAUUUUCGGCGGCC - 70
Stem-loop(if miRNA) --              CUG       C       UG
  CCGCCGAAAGUAAG   CUAUUUU GGCGGUC  A
  ||||||||||||||   ||||||| |||||||
  GGCGGCUUUUAUUC   GAUAAAA CCGCCGG  C
CC              --A       A       UG
Stem-loop sequence CCGCCGAAAGUAAGCUGCUAUUUUCGGCGGUCUGACGUGGCCGCCAAAAAUAGACUUAUUUUCGGCGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT065567.1
ncRNA:24   CCGGCGGCUUUUAUUCAGAUAAAA   1
  *|||||||||||||||*|||||||
targets:1033   AGCCGCCGAAAAUAAGGCUAUUUU   1056

1.5 Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds NA coding protein psRNATarget
BT065567.1
ncRNA:24   CCGGCGGCUUUUAUUCAGAUAAAA   1
  *|||||||||||||||*|||||||
targets:1074   AGCCGCCGAAAAUAAGGCUAUUUU   1097

1.5 Zea mays full-length cDNA clone ZM_BFb0298D06 mRNA, complete cds NA coding protein psRNATarget