Search result

BaseInfo

ncRNA ID novel_zma_miR11583
Species Zea mays
Class miRNA
Genome position Chr8:18463436-18463511 [-]
Reference genome RefGen_v4
Source SRR1997865;SRR5451006
Length 24
Mature sequence(if miRNA) 1 - GGGGCGGACUGUCCGCGGCCUGGU - 24
Stem-loop(if miRNA) --G     --           ---G  CUGGUGCGAGGCG
   GGGCC  GGACGGUCCGC    GC             C
   |||||  |||||||||||    ||             G
   UCCGG  CCUGUCAGGCG    CG             G
UGG     CG           GGGA  CGUCUCUCAUAGU
Stem-loop sequence GGGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGAUACUCUCUGCGCAGGGGCGGACUGUCCGCGGCCUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539115.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *|||||||||||||||||||||||
targets:2707   CCCAGGCCGCGGACAGUCCGCCCC   2730

0.0 PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA NA coding protein psRNATarget
NM_001196968.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *=||||||||||||||||||||||
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

0.0 Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA NA coding protein psRNATarget
BT088349.1
ncRNA:24   UGGUCCGGCGCCUGUCAGGCGGGG   1
  *=||||||||||||||||||||||
targets:1264   CUCAGGCCGCGGACAGUCCGCCCC   1287

0.0 Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds NA coding protein psRNATarget