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BaseInfo

ncRNA ID	novel_zma_miR11579
Species	Zea mays
Class	miRNA
Genome position	Chr3:701372-701500 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	21
Mature sequence(if miRNA)	1 - GUAAAAAUGAGGAACCUGACA - 21
Stem-loop(if miRNA)	--CCGAUG                                UCUAA             CAG     U         UCCUCAUUUUUACCCUUAGUCGUGUUUUUUUU     AGUUUUGCUCUUC   UGUUC A         ||||||||||||||||||||||||||||||||     |||||||||||||   |||||         AGGAGUAAAAAUGGGAAUCAGUAUAAAAAAAG     UCAAAAUGGGAAG   ACGAG U ACAGUCCA                                --UAG             ---     A
Stem-loop sequence	CCGAUGUCCUCAUUUUUACCCUUAGUCGUGUUUUUUUUUCUAAAGUUUUGCUCUUCCAGUGUUCUAUAGAGCAGAAGGGUAAAACUGAUGAAAAAAAUAUGACUAAGGGUAAAAAUGAGGAACCUGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001291650.1	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   |||||**|||||||||||||= targets:1059   UGUCACCUUCCUCAUUUUUAU   1079 Target Full Sequence	3.0	Zea mays (+)-neomenthol dehydrogenase (pco096967), mRNA	NA	coding protein	psRNATarget
BT086309.1	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   |||||**|||||||||||||= targets:1059   UGUCACCUUCCUCAUUUUUAU   1079 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0149I18 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008663690.2	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   |||||**|||||||||||||= targets:1120   UGUCACCUUCCUCAUUUUUAU   1140 Target Full Sequence	3.0	PREDICTED: Zea mays (+)-neomenthol dehydrogenase (pco096967), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545193.1	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   **|||||*||*|||||||||| targets:495   CAUCAGGAUCGUCAUUUUUAC   515 Target Full Sequence	2.5	PREDICTED: Zea mays Vacuolar cation/proton exchanger 2 (LOC100384161), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069344.1	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   **|||||*||*|||||||||| targets:442   CAUCAGGAUCGUCAUUUUUAC   462 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0145J04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176739.1	ncRNA:21   ACAGUCCAAGGAGUAAAAAUG   1   **|||||*||*|||||||||| targets:442   CAUCAGGAUCGUCAUUUUUAC   462 Target Full Sequence	2.5	Zea mays Vacuolar cation/proton exchanger 2 (LOC100384161), mRNA	NA	coding protein	psRNATarget