Search result

BaseInfo

ncRNA ID novel_zma_miR11573
Species Zea mays
Class miRNA
Genome position Chr3:36807829-36807905 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 54 - AGAACCCUGUUUUCCCAAAGAAUU - 77
Stem-loop(if miRNA) --A     C      C    A   UUUUUAUUUUCCAA
   GAACC UGUUUU CCAA GAA              A
   ||||| |||||| |||| |||              A
   CUUGG ACAAAA GGUU UUU              A
AUC     A      A    C   UUUACUUGAUUAAA
Stem-loop sequence AGAACCCUGUUUUCCCAAAGAAUUUUUAUUUUCCAAAAAAAAUUAGUUCAUUUUUUCUUGGAAAAACAAGGUUCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ055202.1
ncRNA:24   UUAAGAAACCCUUUUGUCCCAAGA   1
  =|||-|||||*||||||*||||||
targets:1899   GAUU-UUUGGAAAAACAAGGUUCU   1921

2.5 TSA: Zea mays contig56324, mRNA sequence NA coding protein psRNATarget