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BaseInfo

ncRNA ID novel_zma_miR11572
Species Zea mays
Class miRNA
Genome position Chr3:40551124-40551200 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 21
Mature sequence(if miRNA) 1 - UUUUGAACUCCCAAACUAGCC - 21
Stem-loop(if miRNA) --                   UA  A     AUU    C
  CUAGUUUGGGAGUUCAGAA  AG AGGGG   UUAG C
  |||||||||||||||||||  || |||||   |||| C
  GAUCAAACCCUCAAGUUUU  UC UCCCC   AAUC C
CC                   UG  C     --C    U
Stem-loop sequence CUAGUUUGGGAGUUCAGAAUAAGAAGGGGAUUUUAGCCCCUCUAACCCCCUCCUGUUUUUGAACUCCCAAACUAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU956908.1
ncRNA:21   CCGAUCAAACCCUCAAGUUUU   1
  |||||||||||*|||||||||
targets:980   GGCUAGUUUGGAAGUUCAAAA   1000

1.5 Zea mays clone 1577150 mRNA sequence NA coding protein psRNATarget
EU940902.1
ncRNA:21   CCGAUCAAACCCUCAAGUUUU   1
  **|*|||||||||*|||||||
targets:397   AACAAGUUUGGGAAUUCAAAA   417

2.5 Zea mays clone 1168227 mRNA sequence NA coding protein psRNATarget