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BaseInfo

ncRNA ID novel_zma_miR11570
Species Zea mays
Class miRNA
Genome position Chr3:59306615-59306690 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 53 - ACAUAAGCUUAUGUCCGACGGCCC - 76
Stem-loop(if miRNA) --ACAUAA                -CCGC   CCAG  
        GCUUAUGUCCGACGGC     CUG    CCC
        ||||||||||||||||     |||    ||U
        CGAAUACAGGCUGCCG     GAC    GGC
GCUGCCGG                AUAUA   UAUA  
Stem-loop sequence ACAUAAGCUUAUGUCCGACGGCCCGCCUGCCAGCCCUCGGAUAUCAGAUAUAGCCGUCGGACAUAAGCGGCCGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167420.1
ncRNA:23   CCGGCAGCCUGUAUUCGAAUACA   1
  ||*||||||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUAUGU   23

0.0 Sequence 5084 from Patent EP2559767 NA coding protein psRNATarget
HI406959.1
ncRNA:23   CCGGCAGCCUGUAUUCGAAUACA   1
  ||*||||||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUAUGU   23

0.0 Sequence 5084 from Patent EP2074227 NA coding protein psRNATarget
LQ239089.1
ncRNA:23   CCGGCAGCCUGUAUUCGAAUACA   1
  ||*||||||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUAUGU   23

0.0 Sequence 5084 from Patent EP2985353 NA coding protein psRNATarget