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BaseInfo

ncRNA ID	novel_zma_miR11567
Species	Zea mays
Class	miRNA
Genome position	Chr3:67483931-67484000 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	47 - AUUUGGUGACCAGAGAAUUGGAGA - 70
Stem-loop(if miRNA)	--A            AG         A     AUG    UUUGGUGACCAG  AAUUGGAGA GAUUU   G    ||||||||||||  ||||||||| |||||    AAAUCACUGGUC  UUAACUUCU CUAAG   A ACC            CU         C     GAG
Stem-loop sequence	AUUUGGUGACCAGAGAAUUGGAGAAGAUUUAUGGAGAGGAAUCCUCUUCAAUUUCCUGGUCACUAAACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU945757.1	ncRNA:24   AGAGG-UUAAGAGACCAGUGGUUUA   1   ||*||-||||=|||||||||||||| targets:61   UCCCCUAAUUUUCUGGUCACCAAAU   85 Target Full Sequence	3.0	Zea mays clone 284734 mRNA sequence	NA	coding protein	psRNATarget
EU241921.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||||||*|||||||||||||||* targets:795   CCUCCAAAUCUCUGGUCACCAAAC   818 Target Full Sequence	2.0	Zea mays ZCN5 (ZCN5) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001112773.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||||||*|||||||||||||||* targets:795   CCUCCAAAUCUCUGGUCACCAAAC   818 Target Full Sequence	2.0	Zea mays ZCN5 protein (ZCN5), mRNA	NA	coding protein	psRNATarget
BT036026.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1120   GCUUCAAUUCACUGGUCACCAAAC   1143 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0092G03 mRNA, complete cds	NA	coding protein	psRNATarget
EU970908.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1178   GCUUCAAUUCACUGGUCACCAAAC   1201 Target Full Sequence	2.0	Zea mays clone 353773 COV1-like protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138498.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1220   GCUUCAAUUCACUGGUCACCAAAC   1243 Target Full Sequence	2.0	Zea mays COV1-like protein (LOC100193368), mRNA	NA	coding protein	psRNATarget
BT035612.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1220   GCUUCAAUUCACUGGUCACCAAAC   1243 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0071P21 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549479.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1325   GCUUCAAUUCACUGGUCACCAAAC   1348 Target Full Sequence	2.0	PREDICTED: Zea mays COV1-like protein (LOC100193368), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT064402.1	ncRNA:24   AGAGGUUAAGAGACCAGUGGUUUA   1   *||=||||||*||||||||||||* targets:1431   GCUUCAAUUCACUGGUCACCAAAC   1454 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0166C02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656364.2	ncRNA:24   AGAG------GUUAAGAGACCAGUGGUUUA   1   |||=------|||||=||||||*||||||| targets:1454   UCUUGUUACACAAUUUUCUGGUAACCAAAU   1483 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100273648), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008656363.1	ncRNA:24   AGAG------GUUAAGAGACCAGUGGUUUA   1   |||=------|||||=||||||*||||||| targets:1347   UCUUGUUACACAAUUUUCUGGUAACCAAAU   1376 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100273648), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT041562.2	ncRNA:24   AGAG------GUUAAGAGACCAGUGGUUUA   1   |||=------|||||=||||||*||||||| targets:1439   UCUUGUUACACAAUUUUCUGGUAACCAAAU   1468 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0004P03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148062.2	ncRNA:24   AGAG------GUUAAGAGACCAGUGGUUUA   1   |||=------|||||=||||||*||||||| targets:1439   UCUUGUUACACAAUUUUCUGGUAACCAAAU   1468 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100273648), mRNA	NA	coding protein	psRNATarget