ncRNA ID | novel_zma_miR11560 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:111565350-111565423 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AACUGAGCAAAAAAACACGACU - 22 |
Stem-loop(if miRNA) |
----U   A                 ----C  UUU    U      UGU UUUUUUGCUCAGUUUUG     CC   UGCU U      ||| |||||||||||||||||     ||   ||||      ACA AAAAAACGAGUCAAAAC     GG   ACGA A UCAGC   -                 AAUAA  -UC    U |
Stem-loop sequence | UUGUAUUUUUUGCUCAGUUUUGCCCUUUUGCUUUAUAGCACUGGAAUAACAAAACUGAGCAAAAAAACACGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001137340.1 |
|
1.5 | Zea mays Serinc-domain containing serine and sphingolipid biosynthesis protein (pco062914), mRNA | NA | coding protein | psRNATarget | |||||||||
BT034169.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0033E10 mRNA, complete cds | NA | coding protein | psRNATarget |