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BaseInfo

ncRNA ID novel_zma_miR11560
Species Zea mays
Class miRNA
Genome position Chr3:111565350-111565423 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 22
Mature sequence(if miRNA) 1 - AACUGAGCAAAAAAACACGACU - 22
Stem-loop(if miRNA) ----U   A                 ----C  UUU    U
     UGU UUUUUUGCUCAGUUUUG     CC   UGCU U
     ||| |||||||||||||||||     ||   ||||
     ACA AAAAAACGAGUCAAAAC     GG   ACGA A
UCAGC   -                 AAUAA  -UC    U
Stem-loop sequence UUGUAUUUUUUGCUCAGUUUUGCCCUUUUGCUUUAUAGCACUGGAAUAACAAAACUGAGCAAAAAAACACGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001137340.1
ncRNA:22   UCAGCACAAAAAAACGAGUCAA   1
  ||||||||||||||*|||||||
targets:1686   AGUCGUGUUUUUUUUCUCAGUU   1707

1.5 Zea mays Serinc-domain containing serine and sphingolipid biosynthesis protein (pco062914), mRNA NA coding protein psRNATarget
BT034169.1
ncRNA:22   UCAGCACAAAAAAACGAGUCAA   1
  ||||||||||||||*|||||||
targets:1686   AGUCGUGUUUUUUUUCUCAGUU   1707

1.5 Zea mays full-length cDNA clone ZM_BFc0033E10 mRNA, complete cds NA coding protein psRNATarget