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BaseInfo

ncRNA ID novel_zma_miR11558
Species Zea mays
Class miRNA
Genome position Chr3:117661551-117661623 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 50 - ACCGACGGGAAUAAGCUCUAAACC - 73
Stem-loop(if miRNA) --            A    C  A            U
  ACCGACGGGAAU AGCU UA ACCGACGAGAAU A
  |||||||||||| |||| || |||||||||||| C
  UGGCUGCCCUUA UUGG AU UGGCUGCUCUUA U
CC            A    U  A            A
Stem-loop sequence ACCGACGGGAAUAAGCUCUAAACCGACGAGAAUUACUAAUUCUCGUCGGUAUAUGGUUAAUUCCCGUCGGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI408690.1
ncRNA:24   CCAAAUCUCGAAUAAGGGCAGCCA   1
  |||||||=|=||||||||||||||
targets:62   GGUUUAGGGUUUAUUCCCGUCGGU   85

2.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
JB169151.1
ncRNA:24   CCAAAUCUCGAAUAAGGGCAGCCA   1
  |||||||=|=||||||||||||||
targets:62   GGUUUAGGGUUUAUUCCCGUCGGU   85

2.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget
LQ240820.1
ncRNA:24   CCAAAUCUCGAAUAAGGGCAGCCA   1
  |||||||=|=||||||||||||||
targets:62   GGUUUAGGGUUUAUUCCCGUCGGU   85

2.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget