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BaseInfo

ncRNA ID novel_zma_miR11557
Species Zea mays
Class miRNA
Genome position Chr10:46770743-46770802 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AAUGAUUCGAAGGACGAAGGUCUU - 24
Stem-loop(if miRNA) --           -GAA       -UA   G
  GACCUUCGUCU    GAUCAUU   UCU A
  |||||||||||    |||||||   |||
  CUGGAAGCAGG    UUAGUAA   AGG G
UU           AAGC       UAA   A
Stem-loop sequence GACCUUCGUCUGAAGAUCAUUUAUCUGAGAGGAAAUAAUGAUUCGAAGGACGAAGGUCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240705.1
ncRNA:24   UUCUGGAAGCAGGAAGCUUAGUAA   1
  |||*|||||||||||||||*||||
targets:4   AAGUCCUUCGUCCUUCGAAGCAUU   27

1.5 Sequence 6700 from Patent EP2985353 NA coding protein psRNATarget
JB169036.1
ncRNA:24   UUCUGGAAGCAGGAAGCUUAGUAA   1
  |||*|||||||||||||||*||||
targets:4   AAGUCCUUCGUCCUUCGAAGCAUU   27

1.5 Sequence 6700 from Patent EP2559767 NA coding protein psRNATarget
HI408575.1
ncRNA:24   UUCUGGAAGCAGGAAGCUUAGUAA   1
  |||*|||||||||||||||*||||
targets:4   AAGUCCUUCGUCCUUCGAAGCAUU   27

1.5 Sequence 6700 from Patent EP2074227 NA coding protein psRNATarget