ncRNA ID | novel_zma_miR11546 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:23432335-23432434 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 77 - CUCGGCAAAGAAUAUGGCACUCGA - 100 |
Stem-loop(if miRNA) |
--       ---      UA     GG      G  U        A     A   GAGUGUU   UUCUUU  CCGAG  UUUUUU UG GGCACUCG CAAAG G   |||||||   ||||||  |||||  |||||| || |||||||| ||||| U   CUCACGG   AAGAAA  GGCUC  GAAAAA AC CCGUGAGC GUUUC U AG       UAU      -C     AU      A  -        C     U |
Stem-loop sequence | GAGUGUUUUCUUUUACCGAGGGUUUUUUGUGUGGCACUCGACAAAGAGUUUCUUUGCCGAGUGCCCAAAAAAAGUACUCGGCAAAGAAUAUGGCACUCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT042352.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001148473.2 |
|
2.0 | Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA | NA | coding protein | psRNATarget |