ncRNA ID | novel_zma_miR11541 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:235303657-235303783 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 104 - UCUGGGACACUCGGCAAAGAGCCC - 127 |
Stem-loop(if miRNA) |
--  G                      A            GA  UAC            U       GC UCUUUGCCGAGUGUCCCGGAUG CACUCGGCAAAG  GU   CUUUGCCGAGUG CUUCC   || |||||||||||||||||||||| ||||||||||||  ||   |||||||||||| ||||C   CG AGAAACGGCUCACAGGGUCUAC GUGAGCCGUUUC  CA   GAAAUGGCUCAC GAAGA CC  -                      C            UA  UAA            -     |
Stem-loop sequence | GCGUCUUUGCCGAGUGUCCCGGAUGACACUCGGCAAAGGAGUUACCUUUGCCGAGUGUCUUCCCAGAAGCACUCGGUAAAGAAUACAUCUUUGCCGAGUGCCAUCUGGGACACUCGGCAAAGAGCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008680068.2 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC103653106 (LOC103653106), mRNA | NA | coding protein | psRNATarget | |||||||||
EU952231.1 |
|
2.5 | Zea mays clone 1234152 mRNA sequence | NA | coding protein | psRNATarget |