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BaseInfo

ncRNA ID novel_zma_miR11539
Species Zea mays
Class miRNA
Genome position Chr3:227001036-227001101 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 43 - AGUACUUUUUCUCGGGCACUCGGU - 66
Stem-loop(if miRNA) --G   -      C   C     A         A
   GAG GCUCGG AAA AGUGC UCGGCAAAG C
   ||| |||||| ||| ||||| |||||||||
   CUC CGGGCU UUU UCAUG AGCCGUUUC U
UGG   A      C   U     -         U
Stem-loop sequence GGAGGCUCGGCAAACAGUGCAUCGGCAAAGACUUCUUUGCCGAGUACUUUUUCUCGGGCACUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008680068.2
ncRNA:24   UGGCUCACGGGCUCUUUUUCAUGA   1
  =|||||||=|||||||||||||=|
targets:135   GCCGAGUGUCCGAGAAAAAGUAUU   158

2.5 PREDICTED: Zea mays uncharacterized LOC103653106 (LOC103653106), mRNA NA coding protein psRNATarget