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BaseInfo

ncRNA ID novel_zma_miR11534
Species Zea mays
Class miRNA
Genome position Chr3:207704958-207705053 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 73 - AGCUAGCACUCGGCAAAGACGCCU - 96
Stem-loop(if miRNA) --   G             C       -U              UAUAAA
  GCG CUUUGCCGAGUGC UGGCUGU  GGCGCUCGGCAAAG      G
  ||| ||||||||||||| |||||||  ||||||||||||||
  CGC GAAACGGCUCACG AUCGACA  UCGUGAGCCGUUUC      A
UC   A             -       UC              UACACA
Stem-loop sequence GCGGCUUUGCCGAGUGCCUGGCUGUUGGCGCUCGGCAAAGUAUAAAGAACACAUCUUUGCCGAGUGCUCUACAGCUAGCACUCGGCAAAGACGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409696.1
ncRNA:24   UC--CGCAGAAACGGCUCACGAUCGA   1
  ||--||*||||||||||||||*|||*
targets:37   AGAAGCCUCUUUGCCGAGUGCCAGCA   62

2.5 Sequence 7821 from Patent EP2074227 NA coding protein psRNATarget
LQ241826.1
ncRNA:24   UC--CGCAGAAACGGCUCACGAUCGA   1
  ||--||*||||||||||||||*|||*
targets:37   AGAAGCCUCUUUGCCGAGUGCCAGCA   62

2.5 Sequence 7821 from Patent EP2985353 NA coding protein psRNATarget
JB170157.1
ncRNA:24   UC--CGCAGAAACGGCUCACGAUCGA   1
  ||--||*||||||||||||||*|||*
targets:37   AGAAGCCUCUUUGCCGAGUGCCAGCA   62

2.5 Sequence 7821 from Patent EP2559767 NA coding protein psRNATarget