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BaseInfo

ncRNA ID novel_zma_miR11531
Species Zea mays
Class miRNA
Genome position Chr3:194981927-194982127 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AAUGGACUGGCACUCGGCAAAGAA - 24
Stem-loop(if miRNA) -A   GA -                 -CCCU  AG    CC  UUUGCC  -                CU     AAA              CAUCUUU   GGU
  AUG  C UGGCACUCGGCAAAGAA     CC  UGGG  CC      AG UAUCUUUGCCGAGUGC  UGGCA   GCACUCGGCAAAGA       GCC   U
  |||  | |||||||||||||||||     ||  ||||  ||      || ||||||||||||||||  |||||   ||||||||||||||       |||
  UAC  G ACCGUGAGCCGUUUCUU     GG  ACCC  GG      UC GUAGAAACGGCUCACG  ACUGU   CGUGAGCCGUUUCU       UGG   C
GA   UG U                 CCUUU  --    UU  -CCAUU  U                --     CAC              --UCCUU   ACC
Stem-loop sequence AAUGGACUGGCACUCGGCAAAGAACCCUCCAGUGGGCCCCUUUGCCAGUAUCUUUGCCGAGUGCCUUGGCAAAAGCACUCGGCAAAGACAUCUUUGCCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGCCACUGUCAGCACUCGGCAAAGAUGUCUUUACCGGUUCCCAGGUUUCCUUCUUUGCCGAGUGCCAUGGUCAUAG