Search result

BaseInfo

ncRNA ID	osa-miRf10750-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CUGCUGCCGACUGGUUUCCAGUCGG - NA
Stem-loop(if miRNA)	U  AU        UUU        G   UC     UUGU GACC AC  CUGACUGG   CCAGUCGG GGC  UUGGG    U |||| ||  ||||||||   |||||||| |||  ||||| CUGG UG  GGCUGACC   GGUCAGCC UCG  GACUU    G     U  GC        UUU        G   UC     UGAC
Stem-loop sequence	GACCUACAUCUGACUGGUUUCCAGUCGGGGGCUCUUGGGUUGUUGCAGUUUCAGCUGCUGCCGACUGGUUUCCAGUCGGCGGUUGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755520.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   |||||||||||||||||||||||** targets:941   CCGACUGGAAACCAGUCGGCAGCUA   965 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346574 (LOC4346574), mRNA	uncharacterized LOC4346574(LOC4346574)	coding protein	psRNATarget
AK064489.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   |||||||||||||||||||||||** targets:711   CCGACUGGAAACCAGUCGGCAGCUA   735 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-111-B12, full insert sequence	NA	coding protein	psRNATarget
XM_015787315.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   |||||||||||||||||||||*||* targets:577   CCGACUGGAAACCAGUCGGCAACAA   601 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group proline-rich proteoglycan 2-like (LOC107281375), transcript variant X1, mRNA	proline-rich proteoglycan 2-like(LOC107281375)	coding protein	psRNATarget
XM_015787316.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   |||||||||||||||||||||*||* targets:577   CCGACUGGAAACCAGUCGGCAACAA   601 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group proline-rich proteoglycan 2-like (LOC107281375), transcript variant X2, mRNA	proline-rich proteoglycan 2-like(LOC107281375)	coding protein	psRNATarget
XM_015793741.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   |||||||||||||||||||||*||* targets:544   CCGACUGGAAACCAGUCGGCAACAA   568 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group neuromodulin-like (LOC107281910), mRNA	neuromodulin-like(LOC107281910)	coding protein	psRNATarget
XM_015763714.1	ncRNA:25   GGCUGACCUUUGGUCAGCCGUCGUC   1   ||*||||||=|||||||||||*||| targets:23   CCAACUGGAGACCAGUCGGCAACAG   47 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279649 (LOC107279649), mRNA	uncharacterized LOC107279649(LOC107279649)	coding protein	psRNATarget
AK288190.1	ncRNA:25   GGCUGAC--CUUUGGUCAGCCGUCGUC   1   ***|*||--|||||||||||||||||| targets:3090   GGAAGUGAAGAAACCAGUCGGCAGCAG   3116 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090006H24, full insert sequence	NA	coding protein	psRNATarget