ncRNA ID | novel_zma_miR11527 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:157897702-157897792 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACCACAUUUUCUCAAGGGAUU - 21 |
Stem-loop(if miRNA) |
--ACCAC     CU                            UUA        AUUUU  CAAGGGAUUUUUAUUUUCCCAAGGGAAA   G        |||||  ||||||||||||||||||||||||||||   U        UAAAA  GUUCCCUAAAAGUAAAGGGGUUCCUUUU   U GUUGAGA     AG                            UAC |
Stem-loop sequence | ACCACAUUUUCUCAAGGGAUUUUUAUUUUCCCAAGGGAAAUUAGUUCAUUUUUCCUUGGGGAAAUGAAAAUCCCUUGGAAAAAUAGAGUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU972304.1 |
|
2.5 | Zea mays clone 379375 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT085232.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0337P12 mRNA, complete cds | NA | coding protein | psRNATarget |