Search result

BaseInfo

ncRNA ID novel_zma_miR11527
Species Zea mays
Class miRNA
Genome position Chr3:157897702-157897792 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 21
Mature sequence(if miRNA) 1 - ACCACAUUUUCUCAAGGGAUU - 21
Stem-loop(if miRNA) --ACCAC     CU                            UUA
       AUUUU  CAAGGGAUUUUUAUUUUCCCAAGGGAAA   G
       |||||  ||||||||||||||||||||||||||||   U
       UAAAA  GUUCCCUAAAAGUAAAGGGGUUCCUUUU   U
GUUGAGA     AG                            UAC
Stem-loop sequence ACCACAUUUUCUCAAGGGAUUUUUAUUUUCCCAAGGGAAAUUAGUUCAUUUUUCCUUGGGGAAAUGAAAAUCCCUUGGAAAAAUAGAGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU972304.1
ncRNA:21   UUAGGGAACUCUUUUACACCA   1
  ||||=||||||||||||*|||
targets:220   AAUCUCUUGAGAAAAUGGGGU   240

2.5 Zea mays clone 379375 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT085232.1
ncRNA:21   UUAGGGAACUCUUUUACACCA   1
  |||*|=*||||||||||||||
targets:1943   AAUACUAUGAGAAAAUGUGGU   1963

3.0 Zea mays full-length cDNA clone ZM_BFb0337P12 mRNA, complete cds NA coding protein psRNATarget