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BaseInfo

ncRNA ID	novel_zma_miR11522
Species	Zea mays
Class	miRNA
Genome position	Chr3:129522911-129522995 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	1 - ACACUAUUUGUAGAAACCUAAGAG - 24
Stem-loop(if miRNA)	--       U                --AUC     U    - U   ACACUAU UGUAGAAACCUAAGAG     CACAU GAAA C C   ||||||| ||||||||||||||||     ||||| |||| | U   UGUGAUA ACAUCUUUGGAUUCUC     GUGUA CUUU G A UC       C                GUGAU     -    A U
Stem-loop sequence	ACACUAUUUGUAGAAACCUAAGAGAUCCACAUUGAAACUCUAUGAUUUCAUGUGUAGUGCUCUUAGGUUUCUACACAUAGUGUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163657.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1321 from Patent EP2559767	NA	coding protein	psRNATarget
JB163429.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1093 from Patent EP2559767	NA	coding protein	psRNATarget
HI403196.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1321 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235098.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1093 from Patent EP2985353	NA	coding protein	psRNATarget
HI402968.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1093 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235326.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:71   CUCUUAGGUUUCUACACAUAGUGU   94 Target Full Sequence	1.5	Sequence 1321 from Patent EP2985353	NA	coding protein	psRNATarget
JB170556.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:68   CUCUUAGGUUUCUACACAUAGUGU   91 Target Full Sequence	1.5	Sequence 8220 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242225.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:68   CUCUUAGGUUUCUACACAUAGUGU   91 Target Full Sequence	1.5	Sequence 8220 from Patent EP2985353	NA	coding protein	psRNATarget
HI410095.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||||||||||||*||||||| targets:68   CUCUUAGGUUUCUACACAUAGUGU   91 Target Full Sequence	1.5	Sequence 8220 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235352.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   =|||||||||||||||*||||||| targets:139   UUCUUAGGUUUCUACACAUAGUGU   162 Target Full Sequence	1.5	Sequence 1347 from Patent EP2985353	NA	coding protein	psRNATarget
HI403222.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   =|||||||||||||||*||||||| targets:139   UUCUUAGGUUUCUACACAUAGUGU   162 Target Full Sequence	1.5	Sequence 1347 from Patent EP2074227	NA	coding protein	psRNATarget
JB163683.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   =|||||||||||||||*||||||| targets:139   UUCUUAGGUUUCUACACAUAGUGU   162 Target Full Sequence	1.5	Sequence 1347 from Patent EP2559767	NA	coding protein	psRNATarget
JB163681.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||*|||||||||*||||||| targets:139   CUCUUAAGUUUCUACACAUAGUGU   162 Target Full Sequence	2.5	Sequence 1345 from Patent EP2559767	NA	coding protein	psRNATarget
HI403220.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||*|||||||||*||||||| targets:139   CUCUUAAGUUUCUACACAUAGUGU   162 Target Full Sequence	2.5	Sequence 1345 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235350.1	ncRNA:24   GAGAAUCCAAAGAUGUUUAUCACA   1   ||||||*|||||||||*||||||| targets:139   CUCUUAAGUUUCUACACAUAGUGU   162 Target Full Sequence	2.5	Sequence 1345 from Patent EP2985353	NA	coding protein	psRNATarget