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BaseInfo

ncRNA ID novel_zma_miR11519
Species Zea mays
Class miRNA
Genome position Chr3:116392900-116392950 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 28 - AUUCCUGUCGGUUUAAGGCUUAUU - 51
Stem-loop(if miRNA) --                      U
  UAAGCCUUAAACCGACGGGGAU A
  |||||||||||||||||||||| G
  AUUCGGAAUUUGGCUGUCCUUA U
UU                      A
Stem-loop sequence UAAGCCUUAAACCGACGGGGAUUAGUAAUUCCUGUCGGUUUAAGGCUUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI408690.1
ncRNA:24   UUAUUCGGAAUUUGGCUGUCCUUA   1
  ||||||||*|||||||||=|||||
targets:24   AAUAAGCCCUAAACCGACGGGAAU   47

2.5 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
LQ240820.1
ncRNA:24   UUAUUCGGAAUUUGGCUGUCCUUA   1
  ||||||||*|||||||||=|||||
targets:24   AAUAAGCCCUAAACCGACGGGAAU   47

2.5 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
JB169151.1
ncRNA:24   UUAUUCGGAAUUUGGCUGUCCUUA   1
  ||||||||*|||||||||=|||||
targets:24   AAUAAGCCCUAAACCGACGGGAAU   47

2.5 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget