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BaseInfo

ncRNA ID novel_zma_miR11518
Species Zea mays
Class miRNA
Genome position Chr3:116158299-116158388 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 23
Mature sequence(if miRNA) 68 - UAUUUUCGGCGGCCAGUGUACGC - 90
Stem-loop(if miRNA)     -  GA              A  C              AGU
GUGU CA  GGCCGCCGAAAAUA GC UAUUUUCGGCGGCC   G
|||| ||  |||||||||||||| || ||||||||||||||   U
CGCA GU  CCGGCGGCUUUUAU CG AUAAAAGCCGCCGG   C
    U  GA              C  A              AGA
Stem-loop sequence GUGUCAGAGGCCGCCGAAAAUAAGCCUAUUUUCGGCGGCCAGUGUCAGAGGCCGCCGAAAAUAAGCCUAUUUUCGGCGGCCAGUGUACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU946477.1
ncRNA:23   CGCAUGUGACCGGCGGCUUUUAU   1
  *|*||||||||=|||||||||||
targets:584   CCUUACACUGGUCGCCGAAAAUA   606

1.5 Zea mays clone 313395 mRNA sequence NA coding protein psRNATarget
XM_020546193.1
ncRNA:23   CGCAUGUGACCGGCGGCUUUUAU   1
  *=|*=|*||||||||||||||||
targets:513   CUGGGCUCUGGCCGCCGAAAAUA   535

2.0 PREDICTED: Zea mays spidroin-1-like (LOC103636899), mRNA NA coding protein psRNATarget