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BaseInfo

ncRNA ID novel_zma_miR11517
Species Zea mays
Class miRNA
Genome position Chr2:87737778-87737844 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 44 - GCCCGUGUAUGAACUCUAUAUAGC - 67
Stem-loop(if miRNA) ---UAU      A    G  UA    -    U   
      UAGAGU UAUG AU  GGCC CAUG GGCU
      |||||| |||| ||  |||| |||| |||A
      AUCUCA GUAU UG  CCGG GUAC CCGG
CGAUAU      A    G  -C    A    -   
Stem-loop sequence UAUUAGAGUAUAUGGAUUAGGCCCAUGUGGCUAGGCCCAUGAGGCCCGUGUAUGAACUCUAUAUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550320.1
ncRNA:24   CGAUAUAUCUCAAGUAUGUGCCCG   1
  ||||||||||||||||||||||||
targets:2701   GCUAUAUAGAGUUCAUACACGGGC   2724

0.0 PREDICTED: Zea mays uncharacterized LOC109944845 (LOC109944845), mRNA NA coding protein psRNATarget