Search result

BaseInfo

ncRNA ID novel_zma_miR11512
Species Zea mays
Class miRNA
Genome position Chr2:62368839-62368913 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 52 - AAUACAACUUAUUUUUGUCGGCCU - 75
Stem-loop(if miRNA) --              UU A     G        C UG
  GCCGACGAAAAUAA  G UGUAU UUCGUCGG C  G
  ||||||||||||||  | ||||| |||||||| |  C
  CGGCUGUUUUUAUU  C ACAUA AAGCAGUC G  U
UC              -- A     A        A UA
Stem-loop sequence GCCGACGAAAAUAAUUGAUGUAUGUUCGUCGGCCUGGCUAUGACUGACGAAAAUACAACUUAUUUUUGUCGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT063679.2
ncRNA:24   UCCGGCUGUUUUUAUUCAACAUAA   1
  |**|=*||||||||||*|||||||
targets:152   AAACUCACAAAAAUAAAUUGUAUU   175

2.5 Zea mays full-length cDNA clone ZM_BFc0093N20 mRNA, complete cds NA coding protein psRNATarget