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BaseInfo

ncRNA ID	novel_zma_miR11510
Species	Zea mays
Class	miRNA
Genome position	Chr2:51941995-51942121 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	104 - AACCAGAGACGUUAGAUUUAAGAU - 127
Stem-loop(if miRNA)	--                  A    UUUGG    U     UAAG           A  UG  G   UUUAGAUCUAACGUCUCU GUUG     UAUA UUUGC    GACACCUUCCG CG  AU A   |||||||||||||||||| ||||     |||| |||||    ||||||||||| ||  || G   GAAUUUAGAUUGCAGAGA CAAC     AUGU AAAUG    UUGUGGAAGGU GU  UG A UA                  C    UAGUA    U     UUUA           G  GA  U
Stem-loop sequence	UUUAGAUCUAACGUCUCUAGUUGUUUGGUAUAUUUUGCUAAGGACACCUUCCGACGUGAUGAGAUGUAGUGGUGGAAGGUGUUAUUUGUAAAUUGUAAUGAUCAACCAGAGACGUUAGAUUUAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087210.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||=|||||||||||||*||| targets:346   AUUUUAGAUCUAACGUCUCUAGUU   369 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
JB163685.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||=|||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	2.5	Sequence 1349 from Patent EP2559767	NA	coding protein	psRNATarget
HI403224.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||=|||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	2.5	Sequence 1349 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235354.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||=|||||||||||||*||| targets:20   AUUUUAGAUCUAACGUCUCUAGUU   43 Target Full Sequence	2.5	Sequence 1349 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235327.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||* targets:20   AUUUUAAAUCUAACGUCUCUAGUC   43 Target Full Sequence	2.5	Sequence 1322 from Patent EP2985353	NA	coding protein	psRNATarget
JB163658.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||* targets:20   AUUUUAAAUCUAACGUCUCUAGUC   43 Target Full Sequence	2.5	Sequence 1322 from Patent EP2559767	NA	coding protein	psRNATarget
HI403197.1	ncRNA:24   UAGAAUUUAGAUUGCAGAGACCAA   1   ||=|||||||||||||||||*||* targets:20   AUUUUAAAUCUAACGUCUCUAGUC   43 Target Full Sequence	2.5	Sequence 1322 from Patent EP2074227	NA	coding protein	psRNATarget