Search result

BaseInfo

ncRNA ID osa-miRf10748-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUACUAGGAUACAUCACAUC - NA
Stem-loop(if miRNA) U      A       CAC         UG      C      UA
 UUGGUU GAUGUGA   AUCCUAGUA  AUGAAU UGGACA  A
 |||||| |||||||   |||||||||  |||||| ||||||  A
 AACCAA CUACACU   UAGGAUCAU  UACUUA ACCUGU  G
A      C       ACA         GU      A      CC
Stem-loop sequence UUUGGUUAGAUGUGACACAUCCUAGUAUGAUGAAUCUGGACAUAAAGCCUGUCCAAAUUCAUUGUACUAGGAUACAUCACAUCCAACCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107672.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  ||||||||||||||||||||
targets:868   GAUGUGAUGUAUCCUAGUAC   887

0.0 Oryza sativa Japonica Group cDNA clone:002-131-H10, full insert sequence NA coding protein psRNATarget
XM_015779585.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  ||||||||||||=|||||||
targets:1754   GAUGUGAUGUAUUCUAGUAC   1773

1.5 PREDICTED: Oryza sativa Japonica Group serine carboxypeptidase-like 45 (LOC4335700), mRNA serine carboxypeptidase-like 45(LOC4335700) coding protein psRNATarget
LQ236305.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  ||||*|||||||||||||||
targets:19   GAUGAGAUGUAUCCUAGUAC   38

1.0 Sequence 2300 from Patent EP2985353 NA coding protein psRNATarget
HI404175.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  ||||*|||||||||||||||
targets:19   GAUGAGAUGUAUCCUAGUAC   38

1.0 Sequence 2300 from Patent EP2074227 NA coding protein psRNATarget
JB164636.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  ||||*|||||||||||||||
targets:19   GAUGAGAUGUAUCCUAGUAC   38

1.0 Sequence 2300 from Patent EP2559767 NA coding protein psRNATarget
AK070885.1
ncRNA:20   CUACACUACAUAGGAUCAUG   1
  |||*||||*|||||||||||
targets:4209   GAUAUGAUAUAUCCUAGUAC   4228

2.5 Oryza sativa Japonica Group cDNA clone:J023064A19, full insert sequence NA coding protein psRNATarget