Search result

BaseInfo

ncRNA ID novel_zma_miR11508
Species Zea mays
Class miRNA
Genome position Chr2:7552236-7552300 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 42 - AUUAUAGCGGAGUGUGCCCUGAGA - 65
Stem-loop(if miRNA) AUUAUAGC  AG     - -     ----AA   C
        GG  UGUGC C CUGAG      ACC G
        ||  ||||| | |||||      |||
        CC  GCAUG G GACUU      UGG A
-CGUGGUU  CA     U A     GAGGAG   A
Stem-loop sequence AUUAUAGCGGAGUGUGCCCUGAGAAACCCGAAGGUGAGGAGUUCAGAGUGUACGACCCUUGGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008650945.1
ncRNA:24   AGAGUCCCGUGUGAGGCGAUAUUA   1
  |||-|||||=|=||||||||||||
targets:828   UCU-AGGGCGCGCUCCGCUAUAAU   850

2.5 PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA NA coding protein psRNATarget
EU952069.1
ncRNA:24   AGAGUCCCGUGUGAGGCGAUAUUA   1
  |||-|||||=|=||||||||||||
targets:836   UCU-AGGGCGCGCUCCGCUAUAAU   858

2.5 Zea mays clone 1155789 hypothetical protein mRNA, complete cds NA coding protein psRNATarget