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BaseInfo

ncRNA ID novel_zma_miR11500
Species Zea mays
Class miRNA
Genome position Chr2:58606379-58606460 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - GCCGAGUGCUAUGACCUGGACACU - 24
Stem-loop(if miRNA) --    G   C                  A CUU    AGU
  UGUC AGG CAUAGCACUCGGCAAAGA G   UACC   A
  |||| ||| |||||||||||||||||| |   ||||
  ACAG UCC GUAUCGUGAGCCGUUUCU C   GUGG   U
UC    G   A                  A UGU    ACC
Stem-loop sequence UGUCGAGGCCAUAGCACUCGGCAAAGAAGCUUUACCAGUAUCCAGGUGUGUCAUCUUUGCCGAGUGCUAUGACCUGGACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406144.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2074227 NA coding protein psRNATarget
LQ238274.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2985353 NA coding protein psRNATarget
JB166605.1
ncRNA:24   UCACAGGUCCAGUAUCGUGAGCCG   1
  ||||||*|||*|||||||||||||
targets:3   AGUGUCAAGGCCAUAGCACUCGGC   26

2.0 Sequence 4269 from Patent EP2559767 NA coding protein psRNATarget