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BaseInfo

ncRNA ID novel_zma_miR11499
Species Zea mays
Class miRNA
Genome position Chr2:61535376-61535514 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - ACAGAGAGGUAUUUUGGCAUUCCC - 24
Stem-loop(if miRNA) --           G     C   C     CCU        C     C C    G U     CCA    UCU
  GAAUGCCGAAA ACCUC CUG CCCUG   UAUCCAUU AGGUA G GUGG C CAACA   UUCU   C
  ||||||||||| ||||| ||| |||||   |||||||| ||||| | |||| | |||||   ||||
  CUUACGGUUUU UGGAG GAC GGGAC   AUAGGUAA UCCGU C CACC G GUUGU   AAGA   C
CC           A     A   A     AAC        A     A A    G U     ---    CCA
Stem-loop sequence GAAUGCCGAAAGACCUCCCUGCCCCUGCCUUAUCCAUUCAGGUACGCGUGGGCUCAACACCAUUCUUCUCCACCAGAAUGUUGUGGCCACACAUGCCUAAAUGGAUACAACAGGGACAGAGAGGUAUUUUGGCAUUCCC