ncRNA ID | novel_zma_miR11497 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:62844300-62844436 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AAUACAACAGCUAUUUUCGUGGGC - 137 |
Stem-loop(if miRNA) |
--                    G    UCUUU    G      AUAC   A   --        G    U   AAUACAACAGCUAUUUUCGU GGCC     GGCC ACGAAA    AGC GCU  AUUUUCGU GGCC U   |||||||||||||||||||| ||||     |||| ||||||    ||| |||  |||||||| |||| U   UUAUGUUGUCGAUAAAAGCA CCGG     CCGG UGCUUU    UCG CGA  UAAAAGCA CCGG U UU                    G    UUGCU    G      --GA   A   CA        G    U |
Stem-loop sequence | AAUACAACAGCUAUUUUCGUGGGCCUCUUUGGCCGACGAAAAUACAGCAGCUAUUUUCGUGGGCCUUUUUGGCCGACGAAAAUACAGCAGCUAGUUUCGUGGGCCUCGUUGGCCGACGAAAAUAGCUGUUGUAUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ089743.1 |
|
3.0 | TSA: Zea mays contig25389, mRNA sequence | NA | coding protein | psRNATarget |