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BaseInfo

ncRNA ID novel_zma_miR11495
Species Zea mays
Class miRNA
Genome position Chr2:74414095-74414147 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AUUACCGAGAGCAGGACUUUACCG - 24
Stem-loop(if miRNA) --CG              A    ACG
    AGAGUCCUGUUCUC GUAA   C
    |||||||||||||| ||||   G
    UUUCAGGACGAGAG CAUU   G
GCCA              C    ACU
Stem-loop sequence CGAGAGUCCUGUUCUCAGUAAACGCGGUCAUUACCGAGAGCAGGACUUUACCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241984.1
ncRNA:24   GCCAUUUCAGGACGAGAGCCAUUA   1
  |||*||||||||||||||*||||*
targets:17   CGGCAAAGUCCUGCUCUCAGUAAC   40

2.5 Sequence 7979 from Patent EP2985353 NA coding protein psRNATarget
HI409854.1
ncRNA:24   GCCAUUUCAGGACGAGAGCCAUUA   1
  |||*||||||||||||||*||||*
targets:17   CGGCAAAGUCCUGCUCUCAGUAAC   40

2.5 Sequence 7979 from Patent EP2074227 NA coding protein psRNATarget
JB170315.1
ncRNA:24   GCCAUUUCAGGACGAGAGCCAUUA   1
  |||*||||||||||||||*||||*
targets:17   CGGCAAAGUCCUGCUCUCAGUAAC   40

2.5 Sequence 7979 from Patent EP2559767 NA coding protein psRNATarget
XM_008658185.2
ncRNA:24   GCCAUUUCAGGACGAGAGCCAUUA   1
  |||*||||||||||*||||||||*
targets:1647   CGGCAAAGUCCUGCGCUCGGUAAA   1670

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget