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BaseInfo

ncRNA ID novel_zma_miR11491
Species Zea mays
Class miRNA
Genome position Chr2:89185551-89185631 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 58 - UCAGAUCGACGAAUCGAAGGCACC - 81
Stem-loop(if miRNA) UCAGA     -    -   A  C   AGAA   ACC    G
     UCGAC GAAU CGA GG ACC    CGA   UGUC A
     ||||| |||| ||| || |||    |||   |||| C
     AGCUG CUUA GCU CC UGG    GCU   GCAG G
ACAGC     U    A   C  A   CGAC   --A    A
Stem-loop sequence UCAGAUCGACGAAUCGAAGGCACCAGAACGAACCUGUCGACGAGACGAUCGCAGCGGUACCCUCGAAUUCUGUCGACGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406803.1
ncRNA:24   CCACGGAAGCUAAGCAGCUAGACU   1
  ||||||||||||||||||||||*|
targets:56   GGUGCCUUCGAUUCGUCGAUCUAA   79

1.5 Sequence 4928 from Patent EP2074227 NA coding protein psRNATarget
LQ238933.1
ncRNA:24   CCACGGAAGCUAAGCAGCUAGACU   1
  ||||||||||||||||||||||*|
targets:56   GGUGCCUUCGAUUCGUCGAUCUAA   79

1.5 Sequence 4928 from Patent EP2985353 NA coding protein psRNATarget
JB167264.1
ncRNA:24   CCACGGAAGCUAAGCAGCUAGACU   1
  ||||||||||||||||||||||*|
targets:56   GGUGCCUUCGAUUCGUCGAUCUAA   79

1.5 Sequence 4928 from Patent EP2559767 NA coding protein psRNATarget