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BaseInfo

ncRNA ID novel_zma_miR11487
Species Zea mays
Class miRNA
Genome position Chr2:108437341-108437410 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 22
Mature sequence(if miRNA) 49 - GCGAAAUACAGUUCGGACGAAC - 70
Stem-loop(if miRNA) --       A   U      GAA  GA   -A   G
  GCGAAAU CAG UCGGAC   CG  CGA  UGA C
  ||||||| ||| ||||||   ||  |||  |||
  CGCUUUA GUU AGUCUG   GC  GCU  AUU G
CU       -   U      AGA  UG   CA   A
Stem-loop sequence GCGAAAUACAGUUCGGACGAACGGACGAAUGAGCGAUUAACUCGGUCGAGAGUCUGAUUUGAUUUCGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654233.2
ncRNA:22   CAAGCAGGCUUGACAUAAAGCG   1
  *|||||=||||||*||||||||
targets:8   AUUCGUUCGAACUCUAUUUCGC   29

2.5 PREDICTED: Zea mays hypothetical protein (LOC103632397), mRNA NA coding protein psRNATarget