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BaseInfo

ncRNA ID novel_zma_miR11486
Species Zea mays
Class miRNA
Genome position Chr2:108445380-108445449 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 22
Mature sequence(if miRNA) 49 - GCGAAAUACAGUUCGGACGAAC - 70
Stem-loop(if miRNA) --       A   U      GAA GGA        CG
  GCGAAAU CAG UCGGAC   C   CGAUUGAG  A
  ||||||| ||| ||||||   |   ||||||||  U
  CGCUUUA GUU AGUCUG   G   GCUGGCUC  U
CU       -   U      --A --A        AA
Stem-loop sequence GCGAAAUACAGUUCGGACGAACGGACGAUUGAGCGAUUAACUCGGUCGAGAGUCUGAUUUGAUUUCGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008654233.2
ncRNA:22   CAAGCAGGCUUGACAUAAAGCG   1
  *|||||=||||||*||||||||
targets:8   AUUCGUUCGAACUCUAUUUCGC   29

2.5 PREDICTED: Zea mays hypothetical protein (LOC103632397), mRNA NA coding protein psRNATarget