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BaseInfo

ncRNA ID	novel_zma_miR11481
Species	Zea mays
Class	miRNA
Genome position	Chr2:115804704-115804783 [-]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	57 - AAAACACUCGACAAAGAAACUCUU - 80
Stem-loop(if miRNA)	--AA        A               C A      UUA     AACACUCG CAAAGAAACUCUUUG C AGUGUU   U     |||||||| ||||||||||||||| | ||||||     UUGUGAGC GUUUCUUUGAGAAAC G UCACAA   U CAGA        C               U C      UUU
Stem-loop sequence	AAAACACUCGACAAAGAAACUCUUUGCCAAGUGUUUUAUUUUUAACACUCGUCAAAGAGUUUCUUUGCCGAGUGUUAGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAAAA   1   ||*||||||||||||||||||||| targets:81   AAAAGUUUCUUUGUCGAGUGUUUU   104 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAAAA   1   ||*||||||||||||||||||||| targets:81   AAAAGUUUCUUUGUCGAGUGUUUU   104 Target Full Sequence	0.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAAAA   1   ||*||||||||||||||||||||| targets:2100   AAAAGUUUCUUUGUCGAGUGUUUU   2123 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAAAA   1   ||*||||||||||||||||||||| targets:2100   AAAAGUUUCUUUGUCGAGUGUUUU   2123 Target Full Sequence	0.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget