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BaseInfo

ncRNA ID novel_zma_miR11475
Species Zea mays
Class miRNA
Genome position Chr2:136110582-136110637 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 33 - AAAUAGUACUAAUUUCGGCGGCCU - 56
Stem-loop(if miRNA) --AAA   UA   A          C   
     UAG  CUA UUUCGGCGGC UAUG
     |||  ||| |||||||||| |||A
     AUC  GAU AAAGCCGCCG AUGG
CUUUA   CC   A          -   
Stem-loop sequence AAAUAGUACUAAUUUCGGCGGCCUAUGAGGUAGCCGCCGAAAAUAGCCCUAAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020541736.1
ncRNA:24   UCCGGCGGCUUUAAUCAUGAUAAA   1
  *||||||||||||||||=||||||
targets:2   UGGCCGCCGAAAUUAGUGCUAUUU   25

1.5 PREDICTED: Zea mays proline-rich protein HaeIII subfamily 1-like (LOC109941206), mRNA NA coding protein psRNATarget