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BaseInfo

ncRNA ID novel_zma_miR11452
Species Zea mays
Class miRNA
Genome position Chr2:233480358-233480412 [-]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - UACGUGAAUAACUGAUACUGGCAC - 24
Stem-loop(if miRNA) --    UG  G   C         AUC
  GCUA  AU AGU AUUUAUGUA   G
  ||||  || ||| |||||||||   C
  CGGU  UA UCA UAAGUGCAU   U
CA    CA  G   A         GUG
Stem-loop sequence GCUAUGAUGAGUCAUUUAUGUAAUCGCUGUGUACGUGAAUAACUGAUACUGGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550893.1
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:515   GUGCCAGGAUCAGUUAUUCACGUA   538

1.0 PREDICTED: Zea mays diacylglycerol O-acyltransferase 2D-like (LOC103650530), mRNA NA coding protein psRNATarget
NM_001159083.2
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:1045   GUGCCAGGAUCAGUUAUUCACGUA   1068

1.0 Zea mays oxidoreductase (LOC100286195), mRNA NA coding protein psRNATarget
EU976070.1
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:1046   GUGCCAGGAUCAGUUAUUCACGUA   1069

1.0 Zea mays clone 510496 oxidoreductase mRNA, complete cds NA coding protein psRNATarget
EU975850.1
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:1236   GUGCCAGGAUCAGUUAUUCACGUA   1259

1.0 Zea mays clone 503046 mRNA sequence NA coding protein psRNATarget
EU940916.1
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:367   GUGCCAGGAUCAGUUAUUCACGUA   390

1.0 Zea mays clone 1212834 mRNA sequence NA coding protein psRNATarget
EU940954.1
ncRNA:24   CACGGUCAUAGUCAAUAAGUGCAU   1
  |||||||*||||||||||||||||
targets:1323   GUGCCAGGAUCAGUUAUUCACGUA   1346

1.0 Zea mays clone 1220838 mRNA sequence NA coding protein psRNATarget