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BaseInfo

ncRNA ID osa-miRf10742-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - AAUGACUACUCCCUCCGUCCCAAA - NA
Stem-loop(if miRNA) GAAC   A   A  AC                        C     ---            --  AA
    UCC UAA UG  UACUCCCUCCGUCCCAAAAUAUAG AACCU   AUUGGAUUAGAC  AC  C
    ||| ||| ||  |||||||||||||||||||||||| |||||   ||||||||||||  ||
    AGG AUU AC  AUGAGGGAGGCAGGGUUUUAUAUC UUGGA   UGACCUAAUCUG  UG  C
--CU   -   A  GU                        C     UCA            GA  AU
Stem-loop sequence GAACUCCAUAAAUGACUACUCCCUCCGUCCCAAAAUAUAGCAACCUAUUGGAUUAGACACAACCUAGUAGGUCUAAUCCAGUACUAGGUUCCUAUAUUUUGGGACGGAGGGAGUAUGCAAUUAGGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288397.1
ncRNA:24   AAACCCUGCCUCCCUCAUCAGUAA   1
  ||||||||||||||||||||=|||
targets:4561   UUUGGGACGGAGGGAGUAGUUAUU   4584

1.5 Oryza sativa Japonica Group cDNA, clone: J090028B18, full insert sequence NA coding protein psRNATarget
AK073190.1
ncRNA:24   AAACCCUGCCUCCCUCAUCAGUAA   1
  *|||*|||||||||||||||||||
targets:1317   AUUGCGACGGAGGGAGUAGUCAUU   1340

0.0 Oryza sativa Japonica Group cDNA clone:J033011P14, full insert sequence NA coding protein psRNATarget
AK066853.1
ncRNA:24   AAACCCUGCCUCCCUCAUCAGUAA   1
  *|||*|||||||||||||||||||
targets:2450   AUUGCGACGGAGGGAGUAGUCAUU   2473

0.0 Oryza sativa Japonica Group cDNA clone:J013077F22, full insert sequence NA coding protein psRNATarget
AK067503.1
ncRNA:24   AAACC-CUGCCUCCCUCAUCAGUAA   1
  |*|||-|||||||||||||||||||
targets:1688   UAUGGCGACGGAGGGAGUAGUCAUU   1712

2.0 Oryza sativa Japonica Group cDNA clone:J013108L16, full insert sequence NA coding protein psRNATarget
XM_015778445.1
ncRNA:24   AA---ACCCUGCCUCCCUCAUCAGUAA   1
  ||---|||*||||||||||||||*|||
targets:1876   UUAAAUGGAACGGAGGGAGUAGUAAUU   1902

2.5 PREDICTED: Oryza sativa Japonica Group phenolic glucoside malonyltransferase 1 (LOC4337152), mRNA phenolic glucoside malonyltransferase 1(LOC4337152) coding protein psRNATarget