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BaseInfo

ncRNA ID	novel_zma_miR11448
Species	Zea mays
Class	miRNA
Genome position	Chr2:238152537-238152655 [+]
Reference genome	RefGen_v4
Source	SRR5100255
Length	24
Mature sequence(if miRNA)	96 - UGCCAAAACUCUGUCUCGGACAGG - 119
Stem-loop(if miRNA)	--GA           A            A   CC C       --CAA       -    U     UUCGGGAUAGA UUUUGGUAGCAC UCC  G UGUUCUC     AUAUACA UCCU G     ||||||||||| |||||||||||| |||  | |||||||     ||||||| ||||     AGGCUCUGUCU AAAACCGUCGUG AGG  C ACAAGAG     UGUGUGU AGGG U GGAC           C            G   AA A       AUCUA       G    A
Stem-loop sequence	GAUUCGGGAUAGAAUUUUGGUAGCACAUCCCCGCUGUUCUCCAAAUAUACAUCCUUGUAGGGAGUGUGUGUAUCUAGAGAACAACAAGGAGGUGCUGCCAAAACUCUGUCUCGGACAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY110597.1	ncRNA:24   GGACAGGCUCUGUCUCAAAACCGU   1   **||*|||*||||*|||||||||| targets:1844   GAUGACCGUGACAAAGUUUUGGCA   1867 Target Full Sequence	2.5	Zea mays CL317_1 mRNA sequence	NA	coding protein	psRNATarget
BT054829.1	ncRNA:24   GGACAGGCUCUGUCUCAAAACCGU   1   **||*|||*||||*|||||||||| targets:2628   GAUGACCGUGACAAAGUUUUGGCA   2651 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0082L02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549792.1	ncRNA:24   GGACAGGCUCUGUCUCAAAACCGU   1   **||*|||*||||*|||||||||| targets:2581   GAUGACCGUGACAAAGUUUUGGCA   2604 Target Full Sequence	2.5	PREDICTED: Zea mays Cleavage and polyadenylation specificity factor subunit 2 (IDP798), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020549791.1	ncRNA:24   GGACAGGCUCUGUCUCAAAACCGU   1   **||*|||*||||*|||||||||| targets:2700   GAUGACCGUGACAAAGUUUUGGCA   2723 Target Full Sequence	2.5	PREDICTED: Zea mays Cleavage and polyadenylation specificity factor subunit 2 (IDP798), transcript variant X3, mRNA	NA	coding protein	psRNATarget