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BaseInfo

ncRNA ID novel_zma_miR11445
Species Zea mays
Class miRNA
Genome position Chr2:228735429-228735489 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 38 - GAGAGAGACGUAUAGAAUUUAUGC - 61
Stem-loop(if miRNA) --     AC     --              U
  AUAAA  CUAUA  UCUCUCUCGUAGUU A
  |||||  |||||  |||||||||||||| U
  UAUUU  GAUAU  AGAGAGAGCAUCAA G
CG     AA     GC              A
Stem-loop sequence AUAAAACCUAUAUCUCUCUCGUAGUUUAUGAAACUACGAGAGAGACGUAUAGAAUUUAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001152461.1
ncRNA:24   CGUAUUUAAGAUAUGCAGAGAGAG   1
  |||*||||||||||||*|||||||
targets:1751   GCACAAAUUCUAUACGCCUCUCUC   1774

1.5 Zea mays uncharacterized LOC100279456 (IDP836), mRNA NA coding protein psRNATarget
BT054268.1
ncRNA:24   CGUAUUUAAGAUAUGCAGAGAGAG   1
  |||*||||||||||||*|||||||
targets:1751   GCACAAAUUCUAUACGCCUCUCUC   1774

1.5 Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds NA coding protein psRNATarget