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BaseInfo

ncRNA ID novel_zma_miR11435
Species Zea mays
Class miRNA
Genome position Chr2:214101873-214102033 [+]
Reference genome RefGen_v4
Source SRR5100255
Length 24
Mature sequence(if miRNA) 1 - UAAUAGAAUUAAUAGUUAGUGGCU - 24
Stem-loop(if miRNA) --UAA                 -        UUA    AUACAU  A   ACUA          ---U       UU UUG   A
     UAGAAUUAAUAGUUAGU GGCUAAAA   GUUG      AU AAC    UAGCUAAUAG    UUAUCUA  U   UAA U
     ||||||||||||||||| ||||||||   ||||      || |||    ||||||||||    |||||||  |   ||| U
     AUUUUGAUUAUUAAUUA CCGAUUUU   CAAU      UA UUG    AUCGAUUGUC    GAUGGAU  A   AUU A
ACGUG                 A        UAA    -CGCUU  A   ----          UAUU       UU -UA   G
Stem-loop sequence UAAUAGAAUUAAUAGUUAGUGGCUAAAAUUAGUUGAUACAUAUAAACACUAUAGCUAAUAGUUUAUCUAUUUUUGUAAAUUAGUUAAUAUUUAGGUAGUUAUCUGUUAGCUAGUUAAUUUCGCUAACAAUUUUUAGCCAAUUAAUUAUUAGUUUUAGUGCA